9年8个月前修改于 9年8个月前IP:四川
833150
4楼

我也测试了一下。分别使用B3LYP/6-31G**和M06-2X/def2TZVP进行几何优化并计算5-氨基四唑的密度。结果如下:

B3LYP/6-31G**

Volume: 630.00144 Bohr^3 ( 93.35660 Angstrom^3)
Estimated density according to mass and volume: 1.5131 g/cm^3
Minimal value: -36.60195 kcal/mol Maximal value: 54.97392 kcal/mol
Overall surface area: 387.10628 Bohr^2 ( 108.40082 Angstrom^2)
Positive surface area: 173.08492 Bohr^2 ( 48.46872 Angstrom^2)
Negative surface area: 214.02137 Bohr^2 ( 59.93210 Angstrom^2)
Overall average value: 0.00029148 a.u. ( 0.18291 kcal/mol)
Positive average value: 0.03376935 a.u. ( 21.19061 kcal/mol)
Negative average value: -0.02678298 a.u. ( -16.80659 kcal/mol)
Overall variance (sigma^2_tot): 0.00075443 a.u.^2 ( 297.06915 (kcal/mol)^2)
Positive variance: 0.00052564 a.u.^2 ( 206.98141 (kcal/mol)^2)
Negative variance: 0.00022878 a.u.^2 ( 90.08774 (kcal/mol)^2)
Balance of charges (miu): 0.21129146
Product of sigma^2_tot and miu: 0.00015940 a.u.^2 ( 62.76817 (kcal/mol)^2)
Internal charge separation (Pi): 0.02993833 a.u. ( 18.78660 kcal/mol)

0.9138*1.5131+0.0028*62.76817+0.0443=1.603

M06-2X/TZVP

Volume: 639.89024 Bohr^3 ( 94.82197 Angstrom^3)
Estimated density according to mass and volume: 1.4897 g/cm^3
Minimal value: -36.45772 kcal/mol Maximal value: 58.45159 kcal/mol
Overall surface area: 392.17047 Bohr^2 ( 109.81893 Angstrom^2)
Positive surface area: 184.59652 Bohr^2 ( 51.69230 Angstrom^2)
Negative surface area: 207.57395 Bohr^2 ( 58.12663 Angstrom^2)
Overall average value: 0.00158584 a.u. ( 0.99513 kcal/mol)
Positive average value: 0.03332935 a.u. ( 20.91450 kcal/mol)
Negative average value: -0.02664382 a.u. ( -16.71926 kcal/mol)
Overall variance (sigma^2_tot): 0.00078132 a.u.^2 ( 307.66095 (kcal/mol)^2)
Positive variance: 0.00056427 a.u.^2 ( 222.19344 (kcal/mol)^2)
Negative variance: 0.00021705 a.u.^2 ( 85.46751 (kcal/mol)^2)
Balance of charges (miu): 0.20062615
Product of sigma^2_tot and miu: 0.00015675 a.u.^2 ( 61.72483 (kcal/mol)^2)
Internal charge separation (Pi): 0.02990414 a.u. ( 18.76514 kcal/mol)

0.9138*1.4897+0.0028*61.72483+0.0443=1.578

两个结果与实验值的差别不是很大。我在想是不是楼主在计算的时候出了什么纰漏……

P.S. 英文维基上查到的5-氨基四唑的密度是1.502 g/cm^3……

评论
文号 / 833150

千古风流
名片发私信
学术分 6
总主题 30 帖总回复 824 楼拥有证书:进士 学者 机友 笔友
注册于 2012/03/11 01:31:18最后登录 2026/09/14 15:54:59
主体类型:个人
所属领域:无
认证方式:手机号
IP归属地:0

个人简介

Bachelor's Degree, Chemistry, Sichuan University

Ph.D, Theoretical and Computational Chemistry, Xiamen University

Site:东方红茶馆

笔记
{{note.content}}
{{n.user.username}}
{{fromNow(n.toc)}} {{n.status === noteStatus.disabled ? "已屏蔽" : ""}} {{n.status === noteStatus.unknown ? "正在审核" : ""}} {{n.status === noteStatus.deleted ? '已删除' : ''}}
  • 编辑
  • 删除
  • {{n.status === 'disabled' ? "解除屏蔽" : "屏蔽" }}
我也是有底线的